mudRapp-seq/CITATION.cff at main · BioMeDS/mudRapp-seq · GitHub

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cff-version: 1.2.0
message: If you use this data/code, please cite both the software repository and the paper (see preferred-citation).
authors:
  - family-names: Ahmad
    given-names: "Shazeb"
    affiliation: "Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Zentrum für Infektionsforschung (Helmholtz Centre for Infection Research), Würzburg, Germany"
  - family-names: Li
    given-names: "Jianhui"
  - family-names: Schaust
    given-names: "Joél"
  - family-names: Gribling-Burrer
    given-names: "Anne-Sophie"
  - family-names: Geiger
    given-names: "Nina"
  - family-names: Fischer
    given-names: "Sabine C"
  - family-names: Ambi
    given-names: "Uddhav B"
  - family-names: Backes
    given-names: "Simone"
  - family-names: Ankenbrand
    given-names: "Markus J"
    orcid: 0000-0002-6620-807X
    affiliation: "Center for Computational and Theoretical Biology, University of Würzburg, Germany"
    email: markus.ankenbrand@uni-wuerzburg.de
  - family-names: Smyth
    given-names: "Redmond P"
    affiliation: "Helmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Zentrum für Infektionsforschung (Helmholtz Centre for Infection Research), Würzburg, Germany"
title: mudRapp-seq
version: 0.3
doi: 10.5281/zenodo.13284978
date-released: 2025-04-17
repository-code: https://github.com/BioMeDS/mudRapp-seq
keywords:
  - Spatial transcriptomics
  - Fluorescence Microscopy
  - Visualization
  - Virology
  - Influenza
license: MIT
url: https://github.com/BioMeDS/mudRapp-seq
preferred-citation:
  type: article
  scope: Cite this paper if you use this code in your research
  authors:
    - family-names: Ahmad
      given-names: "Shazeb"
    - family-names: Li
      given-names: "Jianhui"
    - family-names: Schaust
      given-names: "Joél"
    - family-names: Gribling-Burrer
      given-names: "Anne-Sophie"
    - family-names: Geiger
      given-names: "Nina"
    - family-names: Fischer
      given-names: "Sabine C"
    - family-names: Ambi
      given-names: "Uddhav B"
    - family-names: Backes
      given-names: "Simone"
    - family-names: Ankenbrand
      given-names: "Markus J"
    - family-names: Smyth
      given-names: "Redmond P"
  title: "Visualizing the transcription and replication of influenza A viral RNAs in cells by multiple direct RNA padlock probing and in situ sequencing (mudRapp-seq)"
  year: 2025
  journal: Nucleic Acids Research
  volume: 53
  issue: 11
  doi: 10.1093/nar/gkaf461
  url: https://doi.org/10.1093/nar/gkaf461