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[JOSS review] Unnecessary directory created

Status: Open.

#115 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] Quick Start vignette improvements

Status: Open.

#114 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] Nitpick: counts of reads, not cells

Status: Open.

#113 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] Quick Start example raises an error

Status: Open.

#112 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] Undocumented options and unsafe use of unlink()

Status: Open.

#111 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] Update installation instructions

Status: Open.

#110 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

[JOSS review] OSI approved open source license

Status: Open.

#109 In FredHutch/gimap;

· tomsing1 opened on Feb 22, 2026

Not working for CRISPR DKO screen with no ctrl_ctrl

bugSomething isn't workingSomething isn't working

Status: Open.

#102 In FredHutch/gimap;

· HamdaBinteAjmal opened on May 28, 2025

Update mean_double_control math for pgMI

Status: Open.

#101 In FredHutch/gimap;

· sobrien29 opened on May 15, 2025

Support non pgPEN libraries: Normalization, Documentation, Bug Fixes

Status: Open.

#92 In FredHutch/gimap;

· marissafujimoto opened on Feb 12, 2025

Nice to have: Multiple cell lines in the same calculation

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In FredHutch/gimap;

· sitapriyamoorthi opened on Aug 26, 2024

Windows is not liking gimap ¯\_(ツ)_/¯

Status: Open.

#48 In FredHutch/gimap;

· cansavvy opened on Jul 17, 2024