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PDTG-project
PDTG-project PublicThe personalized high-resolution graph of diploids for analyzing allele-specific expression using graphs.
Jupyter Notebook 7
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CHM13_annotation_resources
CHM13_annotation_resources PublicThis repository contains ANNOVAR annotation databases for CHM13v2.0 to annotate SNPs and indels based on CHM13v2.0 coordinates. It includes the GWAS catalog, ClinVar, and gene annotations.
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marbl/DJCounter
marbl/DJCounter PublicThis repository can be used to calculate the number of DJ counts in the genome aligned to the GRCh38 (broad reference).
Jupyter Notebook 3
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marbl/verkko-fillet
marbl/verkko-fillet PublicPost-verkko graph and assembly curation in Python.
Jupyter Notebook 18
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